Biochemistry and Molecular Biology Resource
Web Lessons |
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Vitamins are low molecular weight organic molecules that are needed to promote a variety of biological processes important to life. They are generally not made in sufficient quantities in our cells and therefore must be obtained through the diet. Information concerning dietary intake requirements and food sources may be obtained from the Food and Nutrition Information Center (United States Department of Agriculture).
The first representatives were initially discovered through separation of water- and fat-soluble components of butter fat This led to classifiying vitamins as water-soluble and fat-soluble.
Water soluble
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Fat solubleA, D, E, K |
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B-complex
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non B-complexC |
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Energy releasingB1, B2, B3, B5, B7 |
HematopoieticB9, B12 |
OtherB6, choline, inositol, carnitine, p-aminobenzoic acid, coenzyme Q, lipoic acid, bioflavinoids |
The original nomenclature was alphabetical in order of discovery (based on correcting some disease or problem) with subscripts added for related molecules. As the structure of each vitamins was determined, chemical names were provided.
Common Historical |
Common Chemical |
| A |
retinol,
retinal, retinoic acid |
|
B1
(antiberiberi factor) |
thiamin(e) |
|
B2 |
riboflavin |
|
B3
(antipellagra factor) |
niacin,
nicotinic acid, nicotinamide |
|
B5 |
pantothenic
acid |
|
B6 |
pyridoxine,
pyridoxal, pyridoxamine |
|
B7 |
biotin |
|
B9 |
folacin,
folic acid |
|
B12
(antipernicious anemia factor |
cobalamin |
|
C
(antiscorbic factor) |
ascorbic
acid |
| D
(antirachitic factor) |
cholecalciferol
(D3), ergocalciferol (D2)] |
| E |
tocopherol |
| K
(antihemmorrhagic factor) |
phylloquinone,
phytylmetnaquinone, phytomenadione (all K1), menaquinone-4 to menaquinone-13
(all K2) |
Vitamin A is most commonly associated
with rhodopsin (cis-retinal
plus the photoreceptor protein opsin) of the visual system. The provitamin is
obtained through the diet from plants rich in carotenoids (
-,
-,
and
-carotenes),
which is then processed in the body, and from animals that have processed the
precursor into the active form. Retinoic acid
acts as a ligand for specific nuclear receptors (retinoic acid receptors and
retinoid X receptors) that regulate gene transcription. Excessive amounts of
the vitamin are toxic (150 mg single dose or 5000 IU/day for several years).
|
|
|
retinol |
|
retinal (retinaldehyde) |
|
retinoic acid |
Vitamin D is also know as the "sunshine" vitamin because sun light converts the precursor 7-dehydrocholesterol, which is found in the skin of animals and humans, into vitamin D3. Ricketts was found to be cured by this fat-soluble factor. Ergocalciferol (D2) is obtained from the irradiation of the plant steroid ergosterol. Both vitamin D3 and D2 are converted in the body through a series of hydroxylations, first to 25-hydroxycholecalciferol (25-ergocalciferol) in the liver, and then 1,25-dihydroxycholecalciferol (1,25-dihydroxyergocalciferol) in the kidneys, the active form (also denoted as calcitriol). The active calcitriol functions are a hormone, binding to vitamin D receptors (nuclear receptors).
cholecalciferol (D3) |
ergocalciferol (D2) |
1,25-dihydroxycholecalciferol (calcitriol) active hormone binds to Vit D receptors |
|
Vitamin E was found during studies on the impact of plant oils on reproduction and provided the name tocopherol (tokos = child birth; pherein = to bear; with "ol" at the end to signify an alcohol). The most active forms of the vitamin have been isolated from plant oils and are indicated in the table below. As a fat-soluble molecule that is easily oxidized, it is found associated with cell membranes where it serves as a lipid antioxidant.
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Vitamin K (K for koagulation)
was found to promote blood clotting (coagulation). Three forms exist. K1
was isolated from alfalfa (green plants) and is called phylloquinone,
phytylmenaquinone, or phytomenadione. K2
was isolated from putrefied fish meal and group of related molecules are called
menaquinone-4 to menaquinone-13,
indicating the number of isoprenyl units associated with the molecule. K3
is a synthetic form containing no isoprenyl groups (menadione).
The vitamin is involved in carboxylase mediated reactions that
convert glutamic acid residues to
-carboxyglutamic
acid (posttranslational modifications), a residue with side groups that bind
Ca2+. The well known coagulation proteins prothrombin, factors VII,
IX, and X are required for blood clotting.
|
phylloquinone (K1) |
menaquinone (K2) |
menadione (K3)
|
Beriberi is a paralyzing disease (Singhalese, beri = weakness) that was cured by providing less polished rice (vitamin is associated with the germ). Thiamin (or thiamine) is converted into the active form (thiamin pyrophosphate, TPP) by the action of thiamin pyrophosphate kinase:
Thiamin is required
for pyruvate dehydrogenase (link between glycolysis and citric acid cycle),
-ketoglutarate
dehydrogenase (citric acid cycle),
-ketoacid
dehydrogenases (branched-chain amino acid oxidation), and transketolase (pentose
phosphate pathway). Thiamin is
rapidly excreted in the urine along with its metabolic products (major products
are pyridine acetic acid and thiazole acetic acid). Thiamin
levels can be obtained by colorimetric assay of the urine or, in a more accurate
assessment, functional measurement of metabolic reations. The most useful for
the latter approach is determining transketolase activity in red blood cells.
|
thiamin (thiamine) |
thiamin pyrophosphate (TPP) |
Vitamin B2 (riboflavin) was initially discovered as the heat-stable yellow-green fluorescent component of water-soluble vitamin B. Riboflavin is processed in the body to form the two prosthetic groups flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD). Note that the sugar derivative connected to the flavin is a reduced sugar (polyhydric alcohol) rather than the ribose of a typical nucleotide. Interconversions between riboflavin, FMN, and FAD are illustrated below.

By definition, prosthetic groups FMN
and FAD are tightly or covalently
bound to their respective proteins. These flavoproteins include acyl CoA dehydrognease
(
-oxidation),
amino acid oxidases, cytochrome c reductase, glutathione reductase
(oxidative stress defense),
-ketoacid
dehydrogenases,
-ketoglutarate
dehydrogenase, pyruvate dehydrogenase, succinate dehydrogenase (complex I of
the respiratory chain), xanthine oxidase (purine catabolism).
|
|
|
| riboflavin |
flavin
mononucleotide (FMN) |
flavin adenine dinucleotide, oxidized FAD |
flavin adenine dinucleotide, reduced FADH2 |
Vitamin B3 (niacin,
nicotinic acid) is not strictly
a vitamin because it can be produced from the metabolism of tryptophan. It is
associated with the disease pellegra (pelle=skin, agra=rough), which in chronic
cases is characterized by dermatitis, diarrhea, and dementia. High doses of
niacin are useful as an antihyperlipidemic.
The redox pair NAD+/NADH
associations include glyceraldehyde-3-phosphate dehydrogenase (glycolysis),
lactate dehydrogenase (anaerobic glycolysis), pyruvate dehydrogenase, isocitrate
dehydrogenae,
-ketoglutarate
dehydrogenase, glucose-6-phosphate dehydrogenase (NADPH,
pentose phosphate pathway), 6-phosphogluconate dehydrogenase (NADPH,
pentose phosphate pathway), complex I of the respiratory chain, and enzymes
of both amino acid and fatty acid oxidation.
|
niacin (nicotinic acid) |
nicotinamide |
nicotinamide adenine dinucleotide, oxidized NAD+ |
nicotinamide adenine dinucleotide, reduced NADH |
nicotinamide adenine dinucleotide phosphate, oxidized NADP+ |
nicotinamide adenine dinucleotide phosphate, reduced NADPH |
Vitamin B5 (pantothenic
acid, pantos = everywhere) consists of pantoic
acid and
-alanine.
It is processed in the body to become a component of coenzyme
A (amino acid, carbohydrate, and lipid metabolism) and acyl
carrier protein (fatty acid synthesis).
|
pantothenic acid |
coenzyme A CoASH |
Vitamin B6 (pyridoxine,
pyridoxal, pyridoxamine)
along with their 5'-phosphates)
are involved in amino acid metabolism (alanine aminotransferase, aspartate aminotransferase,
branched-chain amino acid aminotransferases, cystathionine synthase, kynurenininase,
and aromatic amino acid decarboxylase), glycogen degradation (glycogen phosphorylase),
porphyrin synthesis (
-aminolevulinic
acid synthetase), and in removing steroid hormone-receptor complex from DNA.
There are kinases and phosphatases
involved in adding or removing the phosphate group (OPO3-)
and pyridoxine phosphate oxidase
and aminotransferase for interconverting
pyridoxine-, pyridoxal-,
and pyridoxamine-5'-phosphate.

|
pyridoxine |
pyridoxal |
pyridoxamine |
pyridoxine-5-phosphate |
pyridoxal-5-phosphate |
pyridoxamine-5-phosphate |
Vitamin B7 (biotin,
bios = life) is a prosthetic group of four enzymes in the body, pyruvate carboxylase,
acetyl CoA carboxylase, propionyl CoA carboxylase, and
-methyl
crotonyl CoA carboxylase. It is linked by an amide bond to a lysine
(Lys) residue on the corresponding carboxylase enzyme.
|
|
|
|
| biotin binds to avidin found in raw egg whites |
biocytin |
carboxybiocytin active intermediate |
Vitamin B9 (folic acid or folacin, folium = leaf) is comprised of pteridine, p-aminobenzoic acid, and glutamic acid. Once absorbed into cells, folic acid is reduced to dihydrofolate and then to tetrahydrofolate; both steps catalyzed by dihydrofolate reductase. The major form is the reduced N5-methyl-tetrahydrofolate (N5-methyl-THF (look for the four H in the figure below). There are various intermediates of THF that serve as acceptors and donors of 1-carbon units. These include purine and thymidine synthesis (thymidylate synthase), interconversion of histidine-glutamate (glutamate formiminotransferase), serine-glycine (serine hydroxymethyl transferase), homocysteine-methionine (methionine synthase). Thus folic acid is important for RNA and DNA synthesis, which impacts cell growth and division. A deficiency in folic acid can lead to megaloblastic anemia.
|
folic acid (folacin) |
N5-methyl-tetrahydrofolate (N5-methyl-THF) |
Vitamin B12 (cobalamin, deoxyadenosylcobalamin, methylcobalamin) contains a cobalt ion as part of the porphyrin-like corrin ring. Uptake of extrinsic vitamin B12 requires the presence of intrinsic factor. There are two reactions of importance that require cobalamin. Recycling of methionine (homocysteine to methionine) utilizes methionine synthase, which is also dependent on folic acid, and the conversion of L-methylmalonyl CoA into succinyl CoA (methylmalonyl CoA mutase). A deficiency of vitamin B12 can lead to both megaloblastic (pernicious) anemia and neuropathy. Because folic acid defuciency also can lead to megaloblastic anemia, treating for folic acid deficiency alone can mask cobalamin deficiency if neuropathy is not considered.
|
deoxyadenosylcobalamin (R = 5-deoxyadenosyl) methylcobalamin (R = methyl) |
Vitamin C (ascorbic
acid) is important in the evolution of travel. Long trips
were enabled by including citrus juices. This antiscorbutic factor (scorbutic
= scurvy) has important roles in oxidation-reduction reactions (copper-containing
hydroxylases). Enzymes include proline and lysine hydroxylase (collagen crosslinking)
and dopamine
-hydroxylase
(adrenaline formation from tyrosine). Vitamin
C also plays a role in oxidative stress (free radical scavenger).
ascorbic acid |
dehydroascorbic acid |
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